Load - Run - Save models

Load a Kinetic Model

loadKineticModel.main()

This example illustrates loading, running, and saving a kinetic model defined in kkit format. It uses a default kkit model but you can specify another using the command line

python filename runtime solver.

We use the gsl solver here. The model already defines a couple of plots and sets the runtime 20 secs.

Load an SBML Model

Load a CSpace Model

loadCspaceModel.main()

This example illustrates loading and running, a kinetic model defined in cspace format. We use the gsl solver here. The model already defines a couple of plots and sets the runtime to 3000 seconds.

Save a model into SBML format

convert_Genesis2Sbml.main()

This example illustrates loading a kinetic model defined in Genesis format into Moose using loadModel function and using writeSBML function one can save the model into SBML format.

libsbml should be installed.

Save a model

savemodel.main()

This example illustrates loading a kinetic model defined in Genesis format into Moose using “loadModel” function and using “saveModel” function one can save the model back to Genesis format